Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 AA543401-201ENSMUST00000164248 1269 ntBASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccnb1ip1D3Z3K2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gm25990-201ENSMUST00000102440 86 ntBASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gm18027-201ENSMUST00000218947 619 ntBASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccnb1ip1D3Z3K2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccnb1ip1D3Z3K2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms