Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Gm25911-201ENSMUST00000157621 56 ntBASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Gm43474-201ENSMUST00000196415 774 ntBASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Shd-206ENSMUST00000225145 998 ntBASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav12d-1A0N8R0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Gm12585-201ENSMUST00000117307 290 ntBASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Gm28630-201ENSMUST00000187806 498 ntBASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Gm5264-201ENSMUST00000190584 848 ntBASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav12d-1A0N8R0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav12d-1A0N8R0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.77□□□□□ -0.68
Trav12d-1A0N8R0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav12d-1A0N8R0 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.77□□□□□ -0.68
Trav12d-1A0N8R0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav12d-1A0N8R0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav12d-1A0N8R0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav12d-1A0N8R0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav12d-1A0N8R0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms