Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Gm13453-201ENSMUST00000118708 357 ntBASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Gm7775-201ENSMUST00000218871 853 ntBASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc112A0AUP1 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc112A0AUP1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Ccdc112A0AUP1 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Ccdc112A0AUP1 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Ccdc112A0AUP1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc112A0AUP1 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Gm4875-201ENSMUST00000118257 786 ntBASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc112A0AUP1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Gm17330-201ENSMUST00000221047 165 ntBASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Gm9063-201ENSMUST00000223299 582 ntBASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc112A0AUP1 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Gm13223-201ENSMUST00000118609 747 ntBASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Gm45841-201ENSMUST00000207700 164 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms