Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm12485-201ENSMUST00000119641 291 ntBASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lnp1A0A1B0GSK3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm44487-201ENSMUST00000205145 325 ntBASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lnp1A0A1B0GSK3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Lnp1A0A1B0GSK3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Lnp1A0A1B0GSK3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.15□□□□□ -0.63
Lnp1A0A1B0GSK3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms