Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn8aQ9WTU3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Gm12291-201ENSMUST00000121627 311 ntBASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Gm5370-201ENSMUST00000187187 574 ntBASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Gm19931-201ENSMUST00000198920 368 ntBASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn8aQ9WTU3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Scn8aQ9WTU3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Scn8aQ9WTU3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Scn8aQ9WTU3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Scn8aQ9WTU3 Gm38002-201ENSMUST00000193255 180 ntBASIC13.4□□□□□ -0.27
Scn8aQ9WTU3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.4□□□□□ -0.27
Scn8aQ9WTU3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.4□□□□□ -0.27
Scn8aQ9WTU3 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.4□□□□□ -0.27
Scn8aQ9WTU3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Scn8aQ9WTU3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Scn8aQ9WTU3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Gm3890-201ENSMUST00000182416 207 ntBASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Gm4768-201ENSMUST00000206199 686 ntBASIC13.39□□□□□ -0.27
Scn8aQ9WTU3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms