Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx6Q9R1R0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx6Q9R1R0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx6Q9R1R0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx6Q9R1R0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Lhx6Q9R1R0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx6Q9R1R0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx6Q9R1R0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Lhx6Q9R1R0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx6Q9R1R0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx6Q9R1R0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx6Q9R1R0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx6Q9R1R0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx6Q9R1R0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx6Q9R1R0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Lhx6Q9R1R0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx6Q9R1R0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx6Q9R1R0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Gm5187-201ENSMUST00000117317 991 ntBASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Gm14906-201ENSMUST00000119265 390 ntBASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Gm20574-201ENSMUST00000182867 917 ntBASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Gm19030-201ENSMUST00000194947 552 ntBASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Gm18748-201ENSMUST00000198507 622 ntBASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Mir433-201ENSMUST00000093564 124 ntBASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Gm5605-201ENSMUST00000208940 1305 ntBASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Asb11-202ENSMUST00000036858 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx6Q9R1R0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Mir877-201ENSMUST00000104738 85 ntBASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Gm43177-201ENSMUST00000197032 1107 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 BB187690-201ENSMUST00000198619 1176 ntBASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx6Q9R1R0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms