Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atp6ap1Q9R1Q9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atp6ap1Q9R1Q9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atp6ap1Q9R1Q9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atp6ap1Q9R1Q9 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Atp6ap1Q9R1Q9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Atp6ap1Q9R1Q9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atp6ap1Q9R1Q9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atp6ap1Q9R1Q9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atp6ap1Q9R1Q9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atp6ap1Q9R1Q9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atp6ap1Q9R1Q9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.15□□□□□ -0.3
Atp6ap1Q9R1Q9 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.15□□□□□ -0.3
Atp6ap1Q9R1Q9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.15□□□□□ -0.31
Atp6ap1Q9R1Q9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.15□□□□□ -0.31
Atp6ap1Q9R1Q9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Atp6ap1Q9R1Q9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Gm38223-201ENSMUST00000194484 695 ntBASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atp6ap1Q9R1Q9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atp6ap1Q9R1Q9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atp6ap1Q9R1Q9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atp6ap1Q9R1Q9 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.12□□□□□ -0.31
Atp6ap1Q9R1Q9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Atp6ap1Q9R1Q9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atp6ap1Q9R1Q9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atp6ap1Q9R1Q9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atp6ap1Q9R1Q9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.12□□□□□ -0.31
Atp6ap1Q9R1Q9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atp6ap1Q9R1Q9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atp6ap1Q9R1Q9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms