Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Gm27839-201ENSMUST00000184242 106 ntBASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Gm27486-201ENSMUST00000184923 80 ntBASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf3Q9QXK7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Proscos-202ENSMUST00000178990 666 ntBASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Gm24196-201ENSMUST00000179161 110 ntBASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf3Q9QXK7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cpsf3Q9QXK7 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms