Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Gm4271-201ENSMUST00000174444 973 ntBASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Gm45880-201ENSMUST00000213041 853 ntBASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim54Q9ERP3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Gm27682-201ENSMUST00000183930 110 ntBASIC14.53□□□□□ -0.08
Trim54Q9ERP3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim54Q9ERP3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim54Q9ERP3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim54Q9ERP3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim54Q9ERP3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim54Q9ERP3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trim54Q9ERP3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim54Q9ERP3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim54Q9ERP3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim54Q9ERP3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim54Q9ERP3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim54Q9ERP3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim54Q9ERP3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim54Q9ERP3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim54Q9ERP3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trim54Q9ERP3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Mir1247-201ENSMUST00000116706 82 ntBASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.52□□□□□ -0.09
Trim54Q9ERP3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Gm18054-201ENSMUST00000207539 555 ntBASIC14.52□□□□□ -0.09
Trim54Q9ERP3 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Gm7399-201ENSMUST00000032395 858 ntBASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim54Q9ERP3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim54Q9ERP3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim54Q9ERP3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim54Q9ERP3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim54Q9ERP3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim54Q9ERP3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim54Q9ERP3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim54Q9ERP3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim54Q9ERP3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim54Q9ERP3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim54Q9ERP3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim54Q9ERP3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.51□□□□□ -0.09
Trim54Q9ERP3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim54Q9ERP3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms