Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.28□□□□□ -0.28
Lima1Q9ERG0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lima1Q9ERG0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lima1Q9ERG0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Lima1Q9ERG0 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.27□□□□□ -0.28
Lima1Q9ERG0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lima1Q9ERG0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Lima1Q9ERG0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lima1Q9ERG0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Lima1Q9ERG0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lima1Q9ERG0 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.27□□□□□ -0.28
Lima1Q9ERG0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lima1Q9ERG0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lima1Q9ERG0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
Lima1Q9ERG0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Lima1Q9ERG0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lima1Q9ERG0 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Gm25948-201ENSMUST00000175334 112 ntBASIC13.27□□□□□ -0.29
Lima1Q9ERG0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Gm27622-201ENSMUST00000183779 60 ntBASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lima1Q9ERG0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Gm44719-201ENSMUST00000206404 149 ntBASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.26□□□□□ -0.29
Lima1Q9ERG0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Lima1Q9ERG0 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lima1Q9ERG0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Gm8410-201ENSMUST00000117225 605 ntBASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Gm25144-201ENSMUST00000179561 110 ntBASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Gm25352-201ENSMUST00000179815 110 ntBASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Gm27533-201ENSMUST00000183800 152 ntBASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Gm27430-201ENSMUST00000184585 107 ntBASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Gm44333-201ENSMUST00000197168 107 ntBASIC13.25□□□□□ -0.29
Lima1Q9ERG0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Lima1Q9ERG0 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.25□□□□□ -0.29
Lima1Q9ERG0 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lima1Q9ERG0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms