Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.49□□□□□ -0.41
Cdc40Q9DC48 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Gm9002-201ENSMUST00000178437 499 ntBASIC12.49□□□□□ -0.41
Cdc40Q9DC48 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Gm27701-201ENSMUST00000184498 110 ntBASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.48□□□□□ -0.41
Cdc40Q9DC48 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdc40Q9DC48 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Gm13829-201ENSMUST00000119600 138 ntBASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Gm18905-201ENSMUST00000205454 928 ntBASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Gm18062-201ENSMUST00000208020 547 ntBASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Gm18055-201ENSMUST00000208254 547 ntBASIC12.47□□□□□ -0.41
Cdc40Q9DC48 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.47□□□□□ -0.41
Cdc40Q9DC48 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Gm5356-201ENSMUST00000093326 615 ntBASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms