Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
U2af1Q9D883 Abhd6-203ENSMUST00000225234 1958 ntBASIC17.64■□□□□ 0.41
U2af1Q9D883 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
U2af1Q9D883 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
U2af1Q9D883 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC17.64■□□□□ 0.41
U2af1Q9D883 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
U2af1Q9D883 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
U2af1Q9D883 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.64■□□□□ 0.41
U2af1Q9D883 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
U2af1Q9D883 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.63■□□□□ 0.41
U2af1Q9D883 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.63■□□□□ 0.41
U2af1Q9D883 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.63■□□□□ 0.41
U2af1Q9D883 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC17.63■□□□□ 0.41
U2af1Q9D883 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.63■□□□□ 0.41
U2af1Q9D883 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC17.63■□□□□ 0.41
U2af1Q9D883 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
U2af1Q9D883 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
U2af1Q9D883 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Gm18630-201ENSMUST00000222109 1397 ntBASIC17.63■□□□□ 0.41
U2af1Q9D883 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
U2af1Q9D883 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
U2af1Q9D883 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
U2af1Q9D883 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
U2af1Q9D883 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2af1Q9D883 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2af1Q9D883 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
U2af1Q9D883 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2af1Q9D883 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
U2af1Q9D883 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2af1Q9D883 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2af1Q9D883 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
U2af1Q9D883 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
U2af1Q9D883 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2af1Q9D883 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
U2af1Q9D883 Gm6447-201ENSMUST00000118905 835 ntBASIC17.62■□□□□ 0.41
U2af1Q9D883 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC17.62■□□□□ 0.41
U2af1Q9D883 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2af1Q9D883 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.62■□□□□ 0.41
U2af1Q9D883 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC17.62■□□□□ 0.41
U2af1Q9D883 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.62■□□□□ 0.41
U2af1Q9D883 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2af1Q9D883 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2af1Q9D883 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
U2af1Q9D883 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2af1Q9D883 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2af1Q9D883 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2af1Q9D883 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
U2af1Q9D883 Tmed9-203ENSMUST00000224741 1450 ntBASIC17.62■□□□□ 0.41
U2af1Q9D883 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2af1Q9D883 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
U2af1Q9D883 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2af1Q9D883 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
U2af1Q9D883 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
U2af1Q9D883 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
U2af1Q9D883 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
U2af1Q9D883 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
U2af1Q9D883 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
U2af1Q9D883 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
U2af1Q9D883 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC17.61■□□□□ 0.41
U2af1Q9D883 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
U2af1Q9D883 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.61■□□□□ 0.41
U2af1Q9D883 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC17.61■□□□□ 0.41
U2af1Q9D883 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
U2af1Q9D883 Gm14350-201ENSMUST00000116642 640 ntBASIC17.61■□□□□ 0.41
U2af1Q9D883 Gm11425-201ENSMUST00000119608 498 ntBASIC17.61■□□□□ 0.41
U2af1Q9D883 Gm10156-201ENSMUST00000122364 462 ntBASIC17.61■□□□□ 0.41
U2af1Q9D883 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
U2af1Q9D883 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
U2af1Q9D883 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
U2af1Q9D883 AC155237.1-201ENSMUST00000226196 1279 ntBASIC17.61■□□□□ 0.41
U2af1Q9D883 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
U2af1Q9D883 Gm9396-201ENSMUST00000076703 567 ntBASIC17.61■□□□□ 0.41
U2af1Q9D883 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
U2af1Q9D883 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
U2af1Q9D883 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
U2af1Q9D883 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
U2af1Q9D883 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
U2af1Q9D883 Gm42769-201ENSMUST00000198576 1659 ntBASIC17.61■□□□□ 0.41
U2af1Q9D883 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms