Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Gm6912-201ENSMUST00000117218 544 ntBASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Gm6415-201ENSMUST00000118488 348 ntBASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Gm24420-201ENSMUST00000176676 59 ntBASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Gm10766-202ENSMUST00000194123 606 ntBASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Gm27533-201ENSMUST00000183800 152 ntBASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp5Q9D7S9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Gm15770-201ENSMUST00000117498 584 ntBASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Gm15393-201ENSMUST00000120499 219 ntBASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Gm10253-201ENSMUST00000194270 940 ntBASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Gm46209-201ENSMUST00000217912 553 ntBASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp5Q9D7S9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp5Q9D7S9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp5Q9D7S9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp5Q9D7S9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Chmp5Q9D7S9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp5Q9D7S9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Chmp5Q9D7S9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Chmp5Q9D7S9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp5Q9D7S9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp5Q9D7S9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp5Q9D7S9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp5Q9D7S9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms