Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.77□□□□□ -0.53
Tmem54Q9D7S1 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Gm12928-201ENSMUST00000117115 573 ntBASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tmem54Q9D7S1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Gm8463-201ENSMUST00000208573 613 ntBASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Gm7653-201ENSMUST00000214567 508 ntBASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms