Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Gm23153-201ENSMUST00000175323 313 ntBASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Gm29155-201ENSMUST00000185910 269 ntBASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Gm21811-201ENSMUST00000096485 930 ntBASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.33□□□□□ -0.27
Cdh23Q99PF4 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.33□□□□□ -0.27
Cdh23Q99PF4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdh23Q99PF4 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdh23Q99PF4 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.33□□□□□ -0.27
Cdh23Q99PF4 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Gm37246-201ENSMUST00000192665 835 ntBASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cdh23Q99PF4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Gm14832-201ENSMUST00000121289 322 ntBASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Gm25545-201ENSMUST00000122673 323 ntBASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.32□□□□□ -0.28
Cdh23Q99PF4 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms