Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.43□□□□□ -0.26
Cstf1Q99LC2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Gm6023-201ENSMUST00000118217 606 ntBASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Gm29608-201ENSMUST00000190444 463 ntBASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cstf1Q99LC2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Gm22902-201ENSMUST00000158488 302 ntBASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Gm7029-201ENSMUST00000173226 450 ntBASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Cstf1Q99LC2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Gm13297-201ENSMUST00000120205 934 ntBASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.4□□□□□ -0.26
Cstf1Q99LC2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Gm16372-201ENSMUST00000073088 450 ntBASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms