Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.29□□□□□ -0.12
Pcdha2Q91Y17 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha2Q91Y17 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha2Q91Y17 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.29□□□□□ -0.12
Pcdha2Q91Y17 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha2Q91Y17 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha2Q91Y17 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha2Q91Y17 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha2Q91Y17 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha2Q91Y17 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.29□□□□□ -0.12
Pcdha2Q91Y17 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdha2Q91Y17 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.29□□□□□ -0.12
Pcdha2Q91Y17 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha2Q91Y17 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdha2Q91Y17 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdha2Q91Y17 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha2Q91Y17 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdha2Q91Y17 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Acot6-202ENSMUST00000222921 3622 ntBASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Gm18187-201ENSMUST00000196476 984 ntBASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdha2Q91Y17 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Grk6-205ENSMUST00000224653 2976 ntBASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha2Q91Y17 Gm8213-201ENSMUST00000118191 441 ntBASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 Gm8810-201ENSMUST00000172895 754 ntBASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 Gm7561-201ENSMUST00000211203 886 ntBASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdha2Q91Y17 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms