Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhac1Q91Y10 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhac1Q91Y10 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pcdhac1Q91Y10 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhac1Q91Y10 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhac1Q91Y10 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhac1Q91Y10 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhac1Q91Y10 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhac1Q91Y10 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdhac1Q91Y10 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdhac1Q91Y10 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Pcdhac1Q91Y10 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdhac1Q91Y10 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdhac1Q91Y10 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdhac1Q91Y10 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdhac1Q91Y10 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Gm25925-201ENSMUST00000158314 306 ntBASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Gm7775-201ENSMUST00000218871 853 ntBASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhac1Q91Y10 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhac1Q91Y10 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhac1Q91Y10 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhac1Q91Y10 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhac1Q91Y10 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhac1Q91Y10 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhac1Q91Y10 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhac1Q91Y10 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhac1Q91Y10 Mir698-201ENSMUST00000102164 109 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 119.8 ms