Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trex1Q91XB0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trex1Q91XB0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trex1Q91XB0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trex1Q91XB0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trex1Q91XB0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trex1Q91XB0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trex1Q91XB0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.33■□□□□ 0.04
Trex1Q91XB0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trex1Q91XB0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trex1Q91XB0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trex1Q91XB0 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.32■□□□□ 0.04
Trex1Q91XB0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trex1Q91XB0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Gm7809-201ENSMUST00000153199 742 ntBASIC15.32■□□□□ 0.04
Trex1Q91XB0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trex1Q91XB0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Gm28693-202ENSMUST00000190758 331 ntBASIC15.32■□□□□ 0.04
Trex1Q91XB0 Gm43758-201ENSMUST00000199500 367 ntBASIC15.32■□□□□ 0.04
Trex1Q91XB0 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.32■□□□□ 0.04
Trex1Q91XB0 Gm9368-201ENSMUST00000219348 831 ntBASIC15.32■□□□□ 0.04
Trex1Q91XB0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Gm24526-201ENSMUST00000082921 158 ntBASIC15.32■□□□□ 0.04
Trex1Q91XB0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trex1Q91XB0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Gm13786-201ENSMUST00000122371 333 ntBASIC15.31■□□□□ 0.04
Trex1Q91XB0 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Gm27243-201ENSMUST00000183964 521 ntBASIC15.31■□□□□ 0.04
Trex1Q91XB0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Gm10608-202ENSMUST00000213924 676 ntBASIC15.31■□□□□ 0.04
Trex1Q91XB0 Gm19163-201ENSMUST00000223313 780 ntBASIC15.31■□□□□ 0.04
Trex1Q91XB0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.31■□□□□ 0.04
Trex1Q91XB0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.31■□□□□ 0.04
Trex1Q91XB0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trex1Q91XB0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.3■□□□□ 0.04
Trex1Q91XB0 Gm26185-201ENSMUST00000157692 266 ntBASIC15.3■□□□□ 0.04
Trex1Q91XB0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trex1Q91XB0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trex1Q91XB0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.3■□□□□ 0.04
Trex1Q91XB0 Gm38241-201ENSMUST00000192641 898 ntBASIC15.3■□□□□ 0.04
Trex1Q91XB0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Gm44364-201ENSMUST00000198368 141 ntBASIC15.3■□□□□ 0.04
Trex1Q91XB0 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms