Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps4aQ8VEJ9 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps4aQ8VEJ9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps4aQ8VEJ9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps4aQ8VEJ9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Vps4aQ8VEJ9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps4aQ8VEJ9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps4aQ8VEJ9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps4aQ8VEJ9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps4aQ8VEJ9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps4aQ8VEJ9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps4aQ8VEJ9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Vps4aQ8VEJ9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps4aQ8VEJ9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Gm6266-201ENSMUST00000203844 806 ntBASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.08□□□□□ -0.32
Vps4aQ8VEJ9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Gm4875-201ENSMUST00000118257 786 ntBASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Gm3436-201ENSMUST00000179930 840 ntBASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Gm42612-201ENSMUST00000197986 623 ntBASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Gm43170-201ENSMUST00000199827 612 ntBASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Gm45668-201ENSMUST00000211271 493 ntBASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.07□□□□□ -0.32
Vps4aQ8VEJ9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.06□□□□□ -0.32
Vps4aQ8VEJ9 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Vps4aQ8VEJ9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4aQ8VEJ9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4aQ8VEJ9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4aQ8VEJ9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms