Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.29□□□□□ -0.12
Smg8Q8VE18 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Gm22018-201ENSMUST00000104357 131 ntBASIC14.28□□□□□ -0.12
Smg8Q8VE18 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
Smg8Q8VE18 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.28□□□□□ -0.12
Smg8Q8VE18 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.28□□□□□ -0.12
Smg8Q8VE18 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.28□□□□□ -0.12
Smg8Q8VE18 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smg8Q8VE18 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smg8Q8VE18 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Smg8Q8VE18 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smg8Q8VE18 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smg8Q8VE18 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smg8Q8VE18 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.27□□□□□ -0.12
Smg8Q8VE18 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smg8Q8VE18 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smg8Q8VE18 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smg8Q8VE18 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smg8Q8VE18 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smg8Q8VE18 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smg8Q8VE18 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smg8Q8VE18 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smg8Q8VE18 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smg8Q8VE18 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smg8Q8VE18 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smg8Q8VE18 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smg8Q8VE18 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smg8Q8VE18 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.27□□□□□ -0.12
Smg8Q8VE18 Gm16202-201ENSMUST00000117532 544 ntBASIC14.27□□□□□ -0.13
Smg8Q8VE18 Gm8805-201ENSMUST00000117848 313 ntBASIC14.27□□□□□ -0.13
Smg8Q8VE18 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Gm19184-201ENSMUST00000196798 928 ntBASIC14.27□□□□□ -0.13
Smg8Q8VE18 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Snora73a-201ENSMUST00000082453 205 ntBASIC14.27□□□□□ -0.13
Smg8Q8VE18 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smg8Q8VE18 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smg8Q8VE18 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smg8Q8VE18 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smg8Q8VE18 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smg8Q8VE18 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smg8Q8VE18 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms