Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Gm2495-201ENSMUST00000191160 466 ntBASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Gm11918-201ENSMUST00000121660 179 ntBASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sf3a1Q8K4Z5 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sf3a1Q8K4Z5 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Gm44397-201ENSMUST00000195950 113 ntBASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sf3a1Q8K4Z5 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms