Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.68□□□□□ -0.38
Clrn1Q8K445 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Gm17330-201ENSMUST00000221047 165 ntBASIC12.68□□□□□ -0.38
Clrn1Q8K445 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Gm5161-201ENSMUST00000075243 853 ntBASIC12.68□□□□□ -0.38
Clrn1Q8K445 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn1Q8K445 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.67□□□□□ -0.38
Clrn1Q8K445 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Gm37917-201ENSMUST00000194711 392 ntBASIC12.67□□□□□ -0.38
Clrn1Q8K445 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.67□□□□□ -0.38
Clrn1Q8K445 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.67□□□□□ -0.38
Clrn1Q8K445 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.67□□□□□ -0.38
Clrn1Q8K445 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn1Q8K445 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.66□□□□□ -0.38
Clrn1Q8K445 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.66□□□□□ -0.38
Clrn1Q8K445 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.66□□□□□ -0.38
Clrn1Q8K445 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.66□□□□□ -0.38
Clrn1Q8K445 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.66□□□□□ -0.38
Clrn1Q8K445 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.66□□□□□ -0.38
Clrn1Q8K445 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Gm24447-201ENSMUST00000083977 338 ntBASIC12.66□□□□□ -0.38
Clrn1Q8K445 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn1Q8K445 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms