Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc87Q8CDL9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc87Q8CDL9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Ccdc87Q8CDL9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.27□□□□□ -0.12
Ccdc87Q8CDL9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc87Q8CDL9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.27□□□□□ -0.13
Ccdc87Q8CDL9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc87Q8CDL9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc87Q8CDL9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.27□□□□□ -0.13
Ccdc87Q8CDL9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc87Q8CDL9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc87Q8CDL9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc87Q8CDL9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc87Q8CDL9 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc87Q8CDL9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc87Q8CDL9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc87Q8CDL9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc87Q8CDL9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Ccdc87Q8CDL9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc87Q8CDL9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Mir8102-201ENSMUST00000184148 139 ntBASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Gm27680-201ENSMUST00000184192 160 ntBASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Gm16476-201ENSMUST00000221544 139 ntBASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc87Q8CDL9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Gm15653-201ENSMUST00000119247 907 ntBASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Gm9063-201ENSMUST00000223299 582 ntBASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc87Q8CDL9 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms