Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Gm15240-201ENSMUST00000118156 720 ntBASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Syt7-205ENSMUST00000224135 1557 ntBASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Vcpip1Q8CDG3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vcpip1Q8CDG3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Vcpip1Q8CDG3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vcpip1Q8CDG3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.46□□□□□ -0.1
Vcpip1Q8CDG3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vcpip1Q8CDG3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vcpip1Q8CDG3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vcpip1Q8CDG3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vcpip1Q8CDG3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vcpip1Q8CDG3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms