Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Gm11618-201ENSMUST00000117946 267 ntBASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Mir6546-201ENSMUST00000184460 62 ntBASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd9Q8BYH8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Gm6159-201ENSMUST00000191249 1724 ntBASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Gm14350-201ENSMUST00000116642 640 ntBASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Gm7904-201ENSMUST00000217049 465 ntBASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chd9Q8BYH8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd9Q8BYH8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd9Q8BYH8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Chd9Q8BYH8 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd9Q8BYH8 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
Chd9Q8BYH8 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd9Q8BYH8 Gm38391-201ENSMUST00000191720 4069 ntBASIC10.42□□□□□ -0.74
Chd9Q8BYH8 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd9Q8BYH8 Gm15432-201ENSMUST00000121106 195 ntBASIC10.42□□□□□ -0.74
Chd9Q8BYH8 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.42□□□□□ -0.74
Chd9Q8BYH8 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC10.42□□□□□ -0.74
Chd9Q8BYH8 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.42□□□□□ -0.74
Chd9Q8BYH8 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC10.42□□□□□ -0.74
Chd9Q8BYH8 Gm5513-201ENSMUST00000072982 1218 ntBASIC10.42□□□□□ -0.74
Chd9Q8BYH8 Gm10076-201ENSMUST00000073238 384 ntBASIC10.42□□□□□ -0.74
Chd9Q8BYH8 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Chd9Q8BYH8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chd9Q8BYH8 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.42□□□□□ -0.74
Chd9Q8BYH8 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chd9Q8BYH8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms