Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Gm16215-201ENSMUST00000161990 637 ntBASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Gm29667-201ENSMUST00000190817 490 ntBASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trerf1Q8BXJ2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Gm12585-201ENSMUST00000117307 290 ntBASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Gm2423-201ENSMUST00000074863 733 ntBASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.22□□□□□ -0.13
Trerf1Q8BXJ2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trerf1Q8BXJ2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trerf1Q8BXJ2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trerf1Q8BXJ2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trerf1Q8BXJ2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms