Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Gm6447-201ENSMUST00000118905 835 ntBASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Gm17150-201ENSMUST00000165577 381 ntBASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Gm27839-201ENSMUST00000184242 106 ntBASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Gm18187-201ENSMUST00000196476 984 ntBASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Gm8598-201ENSMUST00000221184 836 ntBASIC13.73□□□□□ -0.21
Nup54Q8BTS4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.73□□□□□ -0.21
Nup54Q8BTS4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.73□□□□□ -0.21
Nup54Q8BTS4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Acot6-202ENSMUST00000222921 3622 ntBASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup54Q8BTS4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms