Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Gm24694-201ENSMUST00000180054 110 ntBASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Gm27663-201ENSMUST00000184839 110 ntBASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Gm43094-201ENSMUST00000196549 921 ntBASIC13.18□□□□□ -0.3
Ccdc116Q80X53 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Gm44872-201ENSMUST00000207864 420 ntBASIC13.18□□□□□ -0.3
Ccdc116Q80X53 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Gm17330-201ENSMUST00000221047 165 ntBASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Gm9797-201ENSMUST00000052902 613 ntBASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Syt7-205ENSMUST00000224135 1557 ntBASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Mir8102-201ENSMUST00000184148 139 ntBASIC13.17□□□□□ -0.3
Ccdc116Q80X53 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.17□□□□□ -0.3
Ccdc116Q80X53 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Gm24447-201ENSMUST00000083977 338 ntBASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc116Q80X53 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc116Q80X53 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms