Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Gm24420-201ENSMUST00000176676 59 ntBASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Mir7221-201ENSMUST00000184009 72 ntBASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Gm45841-201ENSMUST00000207700 164 ntBASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Scaf4Q6PFF0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Gm4804-201ENSMUST00000182234 999 ntBASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Gm18206-201ENSMUST00000207027 926 ntBASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scaf4Q6PFF0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm22065-201ENSMUST00000103753 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm22066-201ENSMUST00000103761 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm24932-201ENSMUST00000103763 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm24115-201ENSMUST00000103799 110 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms