Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Snrnp40Q6PE01 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.77□□□□□ -0.52
Snrnp40Q6PE01 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Snrnp40Q6PE01 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Snrnp40Q6PE01 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Snrnp40Q6PE01 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Snrnp40Q6PE01 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Snrnp40Q6PE01 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Snrnp40Q6PE01 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Snrnp40Q6PE01 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Snrnp40Q6PE01 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Snrnp40Q6PE01 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.77□□□□□ -0.52
Snrnp40Q6PE01 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Snrnp40Q6PE01 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Snrnp40Q6PE01 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Gm10434-201ENSMUST00000101158 471 ntBASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Nsd1-205ENSMUST00000224693 852 ntBASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snrnp40Q6PE01 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snrnp40Q6PE01 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms