Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Gm12928-201ENSMUST00000117115 573 ntBASIC14.17□□□□□ -0.14
Scube3Q66PY1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Gm44397-201ENSMUST00000195950 113 ntBASIC14.17□□□□□ -0.14
Scube3Q66PY1 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.17□□□□□ -0.14
Scube3Q66PY1 Gm17917-201ENSMUST00000218561 953 ntBASIC14.17□□□□□ -0.14
Scube3Q66PY1 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC14.17□□□□□ -0.14
Scube3Q66PY1 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Gm25857-201ENSMUST00000082788 129 ntBASIC14.17□□□□□ -0.14
Scube3Q66PY1 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.17□□□□□ -0.14
Scube3Q66PY1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.17□□□□□ -0.14
Scube3Q66PY1 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.17□□□□□ -0.14
Scube3Q66PY1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Scube3Q66PY1 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.16□□□□□ -0.14
Scube3Q66PY1 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.16□□□□□ -0.14
Scube3Q66PY1 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.16□□□□□ -0.14
Scube3Q66PY1 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scube3Q66PY1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.16□□□□□ -0.14
Scube3Q66PY1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scube3Q66PY1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scube3Q66PY1 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.15□□□□□ -0.14
Scube3Q66PY1 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.15□□□□□ -0.14
Scube3Q66PY1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Gm9723-201ENSMUST00000192100 457 ntBASIC14.15□□□□□ -0.14
Scube3Q66PY1 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Gm42919-201ENSMUST00000197753 1284 ntBASIC14.15□□□□□ -0.14
Scube3Q66PY1 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Gm8463-201ENSMUST00000208573 613 ntBASIC14.15□□□□□ -0.14
Scube3Q66PY1 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.15□□□□□ -0.14
Scube3Q66PY1 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms