Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ndufa4Q62425 Mir125a-201ENSMUST00000083545 68 ntBASIC9.72□□□□□ -0.85
Ndufa4Q62425 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC9.72□□□□□ -0.85
Ndufa4Q62425 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC9.72□□□□□ -0.85
Ndufa4Q62425 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Ndufa4Q62425 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ndufa4Q62425 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ndufa4Q62425 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ndufa4Q62425 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ndufa4Q62425 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC9.72□□□□□ -0.85
Ndufa4Q62425 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ndufa4Q62425 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ndufa4Q62425 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ndufa4Q62425 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ndufa4Q62425 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ndufa4Q62425 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ndufa4Q62425 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ndufa4Q62425 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ndufa4Q62425 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ndufa4Q62425 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Ndufa4Q62425 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC9.71□□□□□ -0.85
Ndufa4Q62425 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ndufa4Q62425 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ndufa4Q62425 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ndufa4Q62425 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ndufa4Q62425 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ndufa4Q62425 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ndufa4Q62425 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ndufa4Q62425 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ndufa4Q62425 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC9.71□□□□□ -0.85
Ndufa4Q62425 Gm37269-201ENSMUST00000193906 1891 ntBASIC9.71□□□□□ -0.85
Ndufa4Q62425 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ndufa4Q62425 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ndufa4Q62425 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ndufa4Q62425 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Ndufa4Q62425 Ighv1-25-201ENSMUST00000195638 345 ntBASIC9.71□□□□□ -0.86
Ndufa4Q62425 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC9.71□□□□□ -0.86
Ndufa4Q62425 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC9.71□□□□□ -0.86
Ndufa4Q62425 Gm9449-201ENSMUST00000207265 1011 ntBASIC9.71□□□□□ -0.86
Ndufa4Q62425 Gm18195-201ENSMUST00000207604 706 ntBASIC9.71□□□□□ -0.86
Ndufa4Q62425 AC166341.4-201ENSMUST00000220625 123 ntBASIC9.71□□□□□ -0.86
Ndufa4Q62425 AC149588.3-201ENSMUST00000227515 150 ntBASIC9.71□□□□□ -0.86
Ndufa4Q62425 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Ndufa4Q62425 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Ndufa4Q62425 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ndufa4Q62425 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Ndufa4Q62425 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ndufa4Q62425 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Ndufa4Q62425 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC9.71□□□□□ -0.86
Ndufa4Q62425 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ndufa4Q62425 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ndufa4Q62425 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ndufa4Q62425 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ndufa4Q62425 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ndufa4Q62425 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ndufa4Q62425 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ndufa4Q62425 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ndufa4Q62425 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ndufa4Q62425 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Gm45743-201ENSMUST00000212701 2795 ntBASIC9.7□□□□□ -0.86
Ndufa4Q62425 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Gm18263-201ENSMUST00000220846 1928 ntBASIC9.7□□□□□ -0.86
Ndufa4Q62425 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC9.7□□□□□ -0.86
Ndufa4Q62425 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Gm20554-201ENSMUST00000177421 2352 ntBASIC9.7□□□□□ -0.86
Ndufa4Q62425 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Gm6226-201ENSMUST00000117765 1146 ntBASIC9.7□□□□□ -0.86
Ndufa4Q62425 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC9.7□□□□□ -0.86
Ndufa4Q62425 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC9.7□□□□□ -0.86
Ndufa4Q62425 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC9.7□□□□□ -0.86
Ndufa4Q62425 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Gm5864-201ENSMUST00000202263 970 ntBASIC9.7□□□□□ -0.86
Ndufa4Q62425 Gm7229-201ENSMUST00000214719 1007 ntBASIC9.7□□□□□ -0.86
Ndufa4Q62425 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC9.7□□□□□ -0.86
Ndufa4Q62425 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms