Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.88□□□□□ -0.03
Ift88Q61371 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.88□□□□□ -0.03
Ift88Q61371 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ift88Q61371 Gm3436-201ENSMUST00000179930 840 ntBASIC14.88□□□□□ -0.03
Ift88Q61371 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.88□□□□□ -0.03
Ift88Q61371 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ift88Q61371 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.88□□□□□ -0.03
Ift88Q61371 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.88□□□□□ -0.03
Ift88Q61371 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ift88Q61371 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ift88Q61371 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ift88Q61371 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ift88Q61371 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Ift88Q61371 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ift88Q61371 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ift88Q61371 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ift88Q61371 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ift88Q61371 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ift88Q61371 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.88□□□□□ -0.03
Ift88Q61371 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ift88Q61371 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Ift88Q61371 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ift88Q61371 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Gm2756-201ENSMUST00000195851 400 ntBASIC14.87□□□□□ -0.03
Ift88Q61371 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.87□□□□□ -0.03
Ift88Q61371 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.87□□□□□ -0.03
Ift88Q61371 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ift88Q61371 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ift88Q61371 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ift88Q61371 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ift88Q61371 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.86□□□□□ -0.03
Ift88Q61371 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.86□□□□□ -0.03
Ift88Q61371 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.86□□□□□ -0.03
Ift88Q61371 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.86□□□□□ -0.03
Ift88Q61371 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
Ift88Q61371 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Ift88Q61371 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.86□□□□□ -0.03
Ift88Q61371 Gm2213-201ENSMUST00000197485 688 ntBASIC14.86□□□□□ -0.03
Ift88Q61371 Gm44344-201ENSMUST00000200287 129 ntBASIC14.86□□□□□ -0.03
Ift88Q61371 Gm43703-201ENSMUST00000200523 763 ntBASIC14.86□□□□□ -0.03
Ift88Q61371 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ift88Q61371 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ift88Q61371 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ift88Q61371 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ift88Q61371 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ift88Q61371 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ift88Q61371 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ift88Q61371 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ift88Q61371 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ift88Q61371 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Ift88Q61371 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ift88Q61371 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.85□□□□□ -0.03
Ift88Q61371 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.85□□□□□ -0.03
Ift88Q61371 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms