Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ClpbQ60649 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClpbQ60649 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.91□□□□□ -0.34
ClpbQ60649 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ClpbQ60649 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.91□□□□□ -0.34
ClpbQ60649 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
ClpbQ60649 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.91□□□□□ -0.34
ClpbQ60649 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Gm15240-201ENSMUST00000118156 720 ntBASIC12.91□□□□□ -0.34
ClpbQ60649 Gm12490-201ENSMUST00000120255 560 ntBASIC12.91□□□□□ -0.34
ClpbQ60649 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.91□□□□□ -0.34
ClpbQ60649 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
ClpbQ60649 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ClpbQ60649 Gm7653-201ENSMUST00000214567 508 ntBASIC12.91□□□□□ -0.34
ClpbQ60649 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.91□□□□□ -0.34
ClpbQ60649 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Gm6180-201ENSMUST00000065243 498 ntBASIC12.91□□□□□ -0.34
ClpbQ60649 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ClpbQ60649 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ClpbQ60649 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClpbQ60649 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
ClpbQ60649 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ClpbQ60649 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.9□□□□□ -0.34
ClpbQ60649 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ClpbQ60649 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ClpbQ60649 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
ClpbQ60649 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ClpbQ60649 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.9□□□□□ -0.34
ClpbQ60649 Gm27772-201ENSMUST00000184900 187 ntBASIC12.9□□□□□ -0.34
ClpbQ60649 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.9□□□□□ -0.34
ClpbQ60649 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.9□□□□□ -0.34
ClpbQ60649 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.9□□□□□ -0.34
ClpbQ60649 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.9□□□□□ -0.34
ClpbQ60649 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ClpbQ60649 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.9□□□□□ -0.34
ClpbQ60649 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClpbQ60649 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
ClpbQ60649 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
ClpbQ60649 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
ClpbQ60649 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClpbQ60649 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
ClpbQ60649 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.89□□□□□ -0.35
ClpbQ60649 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClpbQ60649 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClpbQ60649 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ClpbQ60649 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.89□□□□□ -0.35
ClpbQ60649 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms