Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps54Q5SPW0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Gm12390-201ENSMUST00000117897 397 ntBASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Gm24196-201ENSMUST00000179161 110 ntBASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.1■□□□□ 0.17
Vps54Q5SPW0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Gm6091-201ENSMUST00000098307 165 ntBASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps54Q5SPW0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps54Q5SPW0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Vps54Q5SPW0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vps54Q5SPW0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Vps54Q5SPW0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vps54Q5SPW0 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Vps54Q5SPW0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Vps54Q5SPW0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Gm13829-201ENSMUST00000119600 138 ntBASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Gm43433-201ENSMUST00000196573 481 ntBASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Gm6266-201ENSMUST00000203844 806 ntBASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Gm44064-201ENSMUST00000204964 1087 ntBASIC16.08■□□□□ 0.16
Vps54Q5SPW0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
Vps54Q5SPW0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.08■□□□□ 0.16
Vps54Q5SPW0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms