Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Gm9002-201ENSMUST00000178437 499 ntBASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Gm18473-201ENSMUST00000220543 868 ntBASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nlrc4Q3UP24 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Gm6152-201ENSMUST00000151704 340 ntBASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Gm27892-201ENSMUST00000185017 106 ntBASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Gm5356-201ENSMUST00000093326 615 ntBASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nlrc4Q3UP24 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms