Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Gm22175-201ENSMUST00000175007 78 ntBASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43aQ3TL54 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Gm21470-201ENSMUST00000187680 696 ntBASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43aQ3TL54 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms