Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Gm11524-201ENSMUST00000119349 807 ntBASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Gm27486-201ENSMUST00000184923 80 ntBASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Khdc4Q3TCX3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Gm12742-201ENSMUST00000117326 410 ntBASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Gm6007-201ENSMUST00000208170 823 ntBASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms