Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.62□□□□□ -0.23
Ebf1Q07802 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.62□□□□□ -0.23
Ebf1Q07802 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Ebf1Q07802 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ebf1Q07802 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.61□□□□□ -0.23
Ebf1Q07802 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ebf1Q07802 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.61□□□□□ -0.23
Ebf1Q07802 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.61□□□□□ -0.23
Ebf1Q07802 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.61□□□□□ -0.23
Ebf1Q07802 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Gm19309-201ENSMUST00000218295 205 ntBASIC13.61□□□□□ -0.23
Ebf1Q07802 Gm8598-201ENSMUST00000221184 836 ntBASIC13.61□□□□□ -0.23
Ebf1Q07802 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ebf1Q07802 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ebf1Q07802 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ebf1Q07802 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.6□□□□□ -0.23
Ebf1Q07802 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.6□□□□□ -0.23
Ebf1Q07802 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.6□□□□□ -0.23
Ebf1Q07802 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.6□□□□□ -0.23
Ebf1Q07802 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.6□□□□□ -0.23
Ebf1Q07802 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Proscos-202ENSMUST00000178990 666 ntBASIC13.6□□□□□ -0.23
Ebf1Q07802 Gm27331-201ENSMUST00000183705 60 ntBASIC13.6□□□□□ -0.23
Ebf1Q07802 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.6□□□□□ -0.23
Ebf1Q07802 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.6□□□□□ -0.23
Ebf1Q07802 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.6□□□□□ -0.23
Ebf1Q07802 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.6□□□□□ -0.23
Ebf1Q07802 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.6□□□□□ -0.23
Ebf1Q07802 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ebf1Q07802 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ebf1Q07802 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.59□□□□□ -0.23
Ebf1Q07802 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms