Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.51□□□□□ -0.25
Pfdn6Q03958 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.51□□□□□ -0.25
Pfdn6Q03958 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.51□□□□□ -0.25
Pfdn6Q03958 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.51□□□□□ -0.25
Pfdn6Q03958 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.51□□□□□ -0.25
Pfdn6Q03958 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.5□□□□□ -0.25
Pfdn6Q03958 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pfdn6Q03958 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfdn6Q03958 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Mir874-201ENSMUST00000104769 76 ntBASIC13.5□□□□□ -0.25
Pfdn6Q03958 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Gm9522-201ENSMUST00000182394 926 ntBASIC13.5□□□□□ -0.25
Pfdn6Q03958 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.5□□□□□ -0.25
Pfdn6Q03958 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfdn6Q03958 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.5□□□□□ -0.25
Pfdn6Q03958 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.49□□□□□ -0.25
Pfdn6Q03958 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Gm14057-201ENSMUST00000120631 482 ntBASIC13.49□□□□□ -0.25
Pfdn6Q03958 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Pfdn6Q03958 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pfdn6Q03958 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.49□□□□□ -0.25
Pfdn6Q03958 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pfdn6Q03958 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Pfdn6Q03958 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms