Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.41□□□□□ -0.26
Col6a2Q02788 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.41□□□□□ -0.26
Col6a2Q02788 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.41□□□□□ -0.26
Col6a2Q02788 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.41□□□□□ -0.26
Col6a2Q02788 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.41□□□□□ -0.26
Col6a2Q02788 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.41□□□□□ -0.26
Col6a2Q02788 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col6a2Q02788 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.41□□□□□ -0.26
Col6a2Q02788 Gm7561-201ENSMUST00000211203 886 ntBASIC13.41□□□□□ -0.26
Col6a2Q02788 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col6a2Q02788 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Col6a2Q02788 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.41□□□□□ -0.26
Col6a2Q02788 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a2Q02788 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Col6a2Q02788 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.4□□□□□ -0.26
Col6a2Q02788 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Col6a2Q02788 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.4□□□□□ -0.26
Col6a2Q02788 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Col6a2Q02788 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.4□□□□□ -0.26
Col6a2Q02788 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
Col6a2Q02788 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Col6a2Q02788 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Gm11803-201ENSMUST00000119966 444 ntBASIC13.4□□□□□ -0.26
Col6a2Q02788 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Col6a2Q02788 Gm8598-201ENSMUST00000221184 836 ntBASIC13.4□□□□□ -0.26
Col6a2Q02788 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.4□□□□□ -0.26
Col6a2Q02788 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Col6a2Q02788 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
Col6a2Q02788 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.4□□□□□ -0.26
Col6a2Q02788 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.4□□□□□ -0.26
Col6a2Q02788 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a2Q02788 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.4□□□□□ -0.26
Col6a2Q02788 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col6a2Q02788 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col6a2Q02788 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Col6a2Q02788 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Col6a2Q02788 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.39□□□□□ -0.27
Col6a2Q02788 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.39□□□□□ -0.27
Col6a2Q02788 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.39□□□□□ -0.27
Col6a2Q02788 Mir1982-201ENSMUST00000157368 74 ntBASIC13.39□□□□□ -0.27
Col6a2Q02788 Gm8810-201ENSMUST00000172895 754 ntBASIC13.39□□□□□ -0.27
Col6a2Q02788 Gm29649-201ENSMUST00000185649 419 ntBASIC13.39□□□□□ -0.27
Col6a2Q02788 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.39□□□□□ -0.27
Col6a2Q02788 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.39□□□□□ -0.27
Col6a2Q02788 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.39□□□□□ -0.27
Col6a2Q02788 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Gm10012-201ENSMUST00000078252 192 ntBASIC13.39□□□□□ -0.27
Col6a2Q02788 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms