Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.26□□□□□ -0.61
Npas1P97459 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.26□□□□□ -0.61
Npas1P97459 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Gm6973-201ENSMUST00000117080 721 ntBASIC11.26□□□□□ -0.61
Npas1P97459 Gm14140-201ENSMUST00000119999 995 ntBASIC11.26□□□□□ -0.61
Npas1P97459 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.26□□□□□ -0.61
Npas1P97459 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Gm44492-201ENSMUST00000197012 141 ntBASIC11.26□□□□□ -0.61
Npas1P97459 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.26□□□□□ -0.61
Npas1P97459 Gm2651-201ENSMUST00000203560 838 ntBASIC11.26□□□□□ -0.61
Npas1P97459 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Npas1P97459 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.26□□□□□ -0.61
Npas1P97459 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Npas1P97459 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.26□□□□□ -0.61
Npas1P97459 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
Npas1P97459 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.26□□□□□ -0.61
Npas1P97459 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.26□□□□□ -0.61
Npas1P97459 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Npas1P97459 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Npas1P97459 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.25□□□□□ -0.61
Npas1P97459 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Npas1P97459 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.25□□□□□ -0.61
Npas1P97459 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.25□□□□□ -0.61
Npas1P97459 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.25□□□□□ -0.61
Npas1P97459 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.25□□□□□ -0.61
Npas1P97459 Gm20553-201ENSMUST00000204205 844 ntBASIC11.25□□□□□ -0.61
Npas1P97459 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.25□□□□□ -0.61
Npas1P97459 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.25□□□□□ -0.61
Npas1P97459 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Npas1P97459 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.25□□□□□ -0.61
Npas1P97459 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.25□□□□□ -0.61
Npas1P97459 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.25□□□□□ -0.61
Npas1P97459 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.25□□□□□ -0.61
Npas1P97459 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.25□□□□□ -0.61
Npas1P97459 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Npas1P97459 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.25□□□□□ -0.61
Npas1P97459 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Npas1P97459 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Npas1P97459 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.25□□□□□ -0.61
Npas1P97459 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Npas1P97459 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Npas1P97459 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Npas1P97459 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Npas1P97459 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Npas1P97459 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Npas1P97459 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npas1P97459 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.24□□□□□ -0.61
Npas1P97459 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms