Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC8.88□□□□□ -0.99
PrkdcP97313 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Gm14274-201ENSMUST00000117182 615 ntBASIC8.88□□□□□ -0.99
PrkdcP97313 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC8.88□□□□□ -0.99
PrkdcP97313 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC8.88□□□□□ -0.99
PrkdcP97313 CT030637.1-201ENSMUST00000228016 669 ntBASIC8.88□□□□□ -0.99
PrkdcP97313 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
PrkdcP97313 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC8.88□□□□□ -0.99
PrkdcP97313 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Gm43823-201ENSMUST00000197391 1808 ntBASIC8.88□□□□□ -0.99
PrkdcP97313 Gm6630-201ENSMUST00000119199 454 ntBASIC8.88□□□□□ -0.99
PrkdcP97313 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Gm8723-201ENSMUST00000166076 820 ntBASIC8.88□□□□□ -0.99
PrkdcP97313 Gm8701-201ENSMUST00000169259 874 ntBASIC8.88□□□□□ -0.99
PrkdcP97313 Gm25998-201ENSMUST00000175397 53 ntBASIC8.88□□□□□ -0.99
PrkdcP97313 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC8.88□□□□□ -0.99
PrkdcP97313 AC108416.1-202ENSMUST00000228927 1201 ntBASIC8.88□□□□□ -0.99
PrkdcP97313 Mirlet7i-201ENSMUST00000083472 85 ntBASIC8.88□□□□□ -0.99
PrkdcP97313 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
PrkdcP97313 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC8.87□□□□□ -0.99
PrkdcP97313 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
PrkdcP97313 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
PrkdcP97313 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Gm13492-201ENSMUST00000119772 665 ntBASIC8.87□□□□□ -0.99
PrkdcP97313 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
PrkdcP97313 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Gm7851-201ENSMUST00000117574 323 ntBASIC8.87□□□□□ -0.99
PrkdcP97313 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC8.87□□□□□ -0.99
PrkdcP97313 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
PrkdcP97313 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC8.87□□□□□ -0.99
PrkdcP97313 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC8.87□□□□□ -0.99
PrkdcP97313 Gm38297-201ENSMUST00000195122 1057 ntBASIC8.87□□□□□ -0.99
PrkdcP97313 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC8.87□□□□□ -0.99
PrkdcP97313 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
PrkdcP97313 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
PrkdcP97313 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
PrkdcP97313 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PrkdcP97313 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC8.87□□□□□ -0.99
PrkdcP97313 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
PrkdcP97313 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC8.86□□□□□ -0.99
PrkdcP97313 Gm25881-201ENSMUST00000157783 103 ntBASIC8.86□□□□□ -0.99
PrkdcP97313 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC8.86□□□□□ -0.99
PrkdcP97313 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Gm23363-201ENSMUST00000175024 79 ntBASIC8.86□□□□□ -0.99
PrkdcP97313 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC8.86□□□□□ -0.99
PrkdcP97313 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
PrkdcP97313 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Gm5525-201ENSMUST00000190438 1312 ntBASIC8.86□□□□□ -0.99
PrkdcP97313 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
PrkdcP97313 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Gm10584-201ENSMUST00000207036 2628 ntBASIC8.86□□□□□ -0.99
PrkdcP97313 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
PrkdcP97313 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Gm27910-201ENSMUST00000185004 107 ntBASIC8.86□□□□□ -0.99
PrkdcP97313 Gm37299-201ENSMUST00000193951 826 ntBASIC8.86□□□□□ -0.99
PrkdcP97313 Gm5852-201ENSMUST00000194119 1021 ntBASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms