Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.48□□□□□ -0.09
Nub1P54729 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nub1P54729 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.48□□□□□ -0.09
Nub1P54729 Gm17330-201ENSMUST00000221047 165 ntBASIC14.48□□□□□ -0.09
Nub1P54729 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.48□□□□□ -0.09
Nub1P54729 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nub1P54729 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.48□□□□□ -0.09
Nub1P54729 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nub1P54729 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.48□□□□□ -0.09
Nub1P54729 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Nub1P54729 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nub1P54729 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Nub1P54729 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nub1P54729 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nub1P54729 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nub1P54729 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nub1P54729 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nub1P54729 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nub1P54729 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nub1P54729 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nub1P54729 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nub1P54729 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.47□□□□□ -0.09
Nub1P54729 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nub1P54729 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Nub1P54729 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.47□□□□□ -0.09
Nub1P54729 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.47□□□□□ -0.09
Nub1P54729 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Nub1P54729 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Nub1P54729 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nub1P54729 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.47□□□□□ -0.09
Nub1P54729 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.47□□□□□ -0.09
Nub1P54729 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.47□□□□□ -0.09
Nub1P54729 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.47□□□□□ -0.09
Nub1P54729 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.47□□□□□ -0.09
Nub1P54729 Gm12403-201ENSMUST00000121384 959 ntBASIC14.47□□□□□ -0.09
Nub1P54729 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.47□□□□□ -0.09
Nub1P54729 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.47□□□□□ -0.09
Nub1P54729 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.47□□□□□ -0.09
Nub1P54729 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.47□□□□□ -0.09
Nub1P54729 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.47□□□□□ -0.09
Nub1P54729 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.47□□□□□ -0.09
Nub1P54729 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.47□□□□□ -0.09
Nub1P54729 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.47□□□□□ -0.09
Nub1P54729 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Nub1P54729 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nub1P54729 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Nub1P54729 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Nub1P54729 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nub1P54729 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.46□□□□□ -0.09
Nub1P54729 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nub1P54729 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nub1P54729 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nub1P54729 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nub1P54729 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Nub1P54729 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nub1P54729 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nub1P54729 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nub1P54729 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nub1P54729 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.46□□□□□ -0.09
Nub1P54729 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nub1P54729 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.46□□□□□ -0.09
Nub1P54729 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nub1P54729 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nub1P54729 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.46□□□□□ -0.09
Nub1P54729 Mir7654-201ENSMUST00000185082 70 ntBASIC14.46□□□□□ -0.09
Nub1P54729 Gm42790-201ENSMUST00000201268 969 ntBASIC14.46□□□□□ -0.09
Nub1P54729 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nub1P54729 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.46□□□□□ -0.09
Nub1P54729 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nub1P54729 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.46□□□□□ -0.09
Nub1P54729 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nub1P54729 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Nub1P54729 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nub1P54729 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nub1P54729 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms