Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.72□□□□□ -0.37
RoraP51448 Gm29127-201ENSMUST00000188304 517 ntBASIC12.72□□□□□ -0.37
RoraP51448 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.72□□□□□ -0.37
RoraP51448 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.72□□□□□ -0.37
RoraP51448 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.72□□□□□ -0.37
RoraP51448 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.72□□□□□ -0.37
RoraP51448 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.72□□□□□ -0.37
RoraP51448 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RoraP51448 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.72□□□□□ -0.37
RoraP51448 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RoraP51448 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
RoraP51448 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RoraP51448 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RoraP51448 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RoraP51448 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RoraP51448 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RoraP51448 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RoraP51448 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
RoraP51448 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
RoraP51448 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RoraP51448 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RoraP51448 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.71□□□□□ -0.37
RoraP51448 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RoraP51448 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.71□□□□□ -0.37
RoraP51448 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.71□□□□□ -0.37
RoraP51448 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RoraP51448 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RoraP51448 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.71□□□□□ -0.37
RoraP51448 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RoraP51448 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.71□□□□□ -0.37
RoraP51448 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.71□□□□□ -0.37
RoraP51448 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
RoraP51448 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RoraP51448 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RoraP51448 Gm9899-201ENSMUST00000065519 555 ntBASIC12.71□□□□□ -0.37
RoraP51448 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RoraP51448 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RoraP51448 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
RoraP51448 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.71□□□□□ -0.38
RoraP51448 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RoraP51448 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RoraP51448 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RoraP51448 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RoraP51448 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
RoraP51448 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.71□□□□□ -0.38
RoraP51448 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RoraP51448 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
RoraP51448 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
RoraP51448 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RoraP51448 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RoraP51448 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RoraP51448 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.7□□□□□ -0.38
RoraP51448 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Gm5687-201ENSMUST00000118252 640 ntBASIC12.7□□□□□ -0.38
RoraP51448 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.7□□□□□ -0.38
RoraP51448 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Gm6152-201ENSMUST00000151704 340 ntBASIC12.7□□□□□ -0.38
RoraP51448 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
RoraP51448 Gm45784-201ENSMUST00000188360 142 ntBASIC12.7□□□□□ -0.38
RoraP51448 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.7□□□□□ -0.38
RoraP51448 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
RoraP51448 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.7□□□□□ -0.38
RoraP51448 Gm8598-201ENSMUST00000221184 836 ntBASIC12.7□□□□□ -0.38
RoraP51448 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RoraP51448 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RoraP51448 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RoraP51448 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms