Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Prox1P48437 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prox1P48437 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Prox1P48437 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Prox1P48437 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Prox1P48437 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Prox1P48437 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prox1P48437 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prox1P48437 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prox1P48437 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Prox1P48437 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Prox1P48437 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prox1P48437 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prox1P48437 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.9□□□□□ -0.34
Prox1P48437 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.9□□□□□ -0.34
Prox1P48437 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.9□□□□□ -0.34
Prox1P48437 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.9□□□□□ -0.34
Prox1P48437 Gm29741-201ENSMUST00000192667 421 ntBASIC12.9□□□□□ -0.34
Prox1P48437 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Prox1P48437 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Prox1P48437 Gm18027-201ENSMUST00000218947 619 ntBASIC12.9□□□□□ -0.34
Prox1P48437 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prox1P48437 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.9□□□□□ -0.34
Prox1P48437 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Prox1P48437 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prox1P48437 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prox1P48437 Paupar-201ENSMUST00000194826 3482 ntBASIC12.9□□□□□ -0.34
Prox1P48437 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prox1P48437 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.9□□□□□ -0.35
Prox1P48437 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Prox1P48437 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.89□□□□□ -0.35
Prox1P48437 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.89□□□□□ -0.35
Prox1P48437 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.89□□□□□ -0.35
Prox1P48437 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Gm45453-201ENSMUST00000211758 853 ntBASIC12.89□□□□□ -0.35
Prox1P48437 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.89□□□□□ -0.35
Prox1P48437 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.89□□□□□ -0.35
Prox1P48437 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Mir125a-201ENSMUST00000083545 68 ntBASIC12.89□□□□□ -0.35
Prox1P48437 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Prox1P48437 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.89□□□□□ -0.35
Prox1P48437 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Syt7-205ENSMUST00000224135 1557 ntBASIC12.89□□□□□ -0.35
Prox1P48437 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Prox1P48437 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.89□□□□□ -0.35
Prox1P48437 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Prox1P48437 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Prox1P48437 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Prox1P48437 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prox1P48437 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.88□□□□□ -0.35
Prox1P48437 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Prox1P48437 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.88□□□□□ -0.35
Prox1P48437 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.88□□□□□ -0.35
Prox1P48437 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.88□□□□□ -0.35
Prox1P48437 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Prox1P48437 Gm10576-201ENSMUST00000191927 825 ntBASIC12.88□□□□□ -0.35
Prox1P48437 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.88□□□□□ -0.35
Prox1P48437 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.88□□□□□ -0.35
Prox1P48437 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.88□□□□□ -0.35
Prox1P48437 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms