Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfx3P48381 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfx3P48381 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rfx3P48381 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfx3P48381 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfx3P48381 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfx3P48381 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfx3P48381 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfx3P48381 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfx3P48381 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rfx3P48381 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.15□□□□□ -0.46
Rfx3P48381 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rfx3P48381 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rfx3P48381 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.15□□□□□ -0.46
Rfx3P48381 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.15□□□□□ -0.46
Rfx3P48381 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.15□□□□□ -0.46
Rfx3P48381 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.15□□□□□ -0.46
Rfx3P48381 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.15□□□□□ -0.46
Rfx3P48381 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.15□□□□□ -0.46
Rfx3P48381 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rfx3P48381 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Rfx3P48381 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rfx3P48381 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rfx3P48381 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.15□□□□□ -0.46
Rfx3P48381 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.15□□□□□ -0.46
Rfx3P48381 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfx3P48381 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.15□□□□□ -0.47
Rfx3P48381 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rfx3P48381 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Rfx3P48381 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rfx3P48381 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.14□□□□□ -0.47
Rfx3P48381 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.14□□□□□ -0.47
Rfx3P48381 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.14□□□□□ -0.47
Rfx3P48381 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.14□□□□□ -0.47
Rfx3P48381 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.14□□□□□ -0.47
Rfx3P48381 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rfx3P48381 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rfx3P48381 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.14□□□□□ -0.47
Rfx3P48381 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rfx3P48381 Gm13453-201ENSMUST00000118708 357 ntBASIC12.14□□□□□ -0.47
Rfx3P48381 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.14□□□□□ -0.47
Rfx3P48381 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Gm27680-201ENSMUST00000184192 160 ntBASIC12.14□□□□□ -0.47
Rfx3P48381 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rfx3P48381 Gm7063-201ENSMUST00000186840 981 ntBASIC12.14□□□□□ -0.47
Rfx3P48381 Gm38294-201ENSMUST00000192831 381 ntBASIC12.14□□□□□ -0.47
Rfx3P48381 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.14□□□□□ -0.47
Rfx3P48381 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Rfx3P48381 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.14□□□□□ -0.47
Rfx3P48381 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rfx3P48381 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfx3P48381 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms