Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm26315-201ENSMUST00000083890 321 ntBASIC12.7□□□□□ -0.38
Nkx2-6P43688 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Nkx2-6P43688 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Nkx2-6P43688 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-6P43688 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.7□□□□□ -0.38
Nkx2-6P43688 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-6P43688 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-6P43688 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-6P43688 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-6P43688 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Nkx2-6P43688 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-6P43688 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-6P43688 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-6P43688 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-6P43688 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm12403-201ENSMUST00000121384 959 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx2-6P43688 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.69□□□□□ -0.38
Nkx2-6P43688 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-6P43688 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Nkx2-6P43688 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.68□□□□□ -0.38
Nkx2-6P43688 Gm26927-201ENSMUST00000182385 965 ntBASIC12.68□□□□□ -0.38
Nkx2-6P43688 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.68□□□□□ -0.38
Nkx2-6P43688 Mir6420-201ENSMUST00000185032 102 ntBASIC12.68□□□□□ -0.38
Nkx2-6P43688 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.68□□□□□ -0.38
Nkx2-6P43688 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms