Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.09□□□□□ -0.63
Hist1h1aP43275 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Gm6916-202ENSMUST00000205523 195 ntBASIC11.09□□□□□ -0.63
Hist1h1aP43275 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Pck2-205ENSMUST00000226352 2784 ntBASIC11.09□□□□□ -0.63
Hist1h1aP43275 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h1aP43275 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Hist1h1aP43275 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Hist1h1aP43275 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1aP43275 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1aP43275 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1aP43275 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1aP43275 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm22065-201ENSMUST00000103753 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm22066-201ENSMUST00000103761 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm24932-201ENSMUST00000103763 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm24115-201ENSMUST00000103799 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm22190-201ENSMUST00000103827 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm22191-201ENSMUST00000103831 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm24721-201ENSMUST00000103849 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm28018-201ENSMUST00000103869 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm26399-201ENSMUST00000103937 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h1aP43275 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Hist1h1aP43275 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm25349-201ENSMUST00000177728 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm23616-201ENSMUST00000177797 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm25871-201ENSMUST00000177816 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm24752-201ENSMUST00000178240 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm24496-201ENSMUST00000178287 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm25649-201ENSMUST00000178476 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm25548-201ENSMUST00000178681 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm23147-201ENSMUST00000178841 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm26095-201ENSMUST00000179270 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm22171-201ENSMUST00000179283 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm23936-201ENSMUST00000179354 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm22619-201ENSMUST00000179516 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm25255-201ENSMUST00000179579 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm24755-201ENSMUST00000179691 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm26506-201ENSMUST00000179692 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm25086-201ENSMUST00000179931 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm23243-201ENSMUST00000180047 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm24659-201ENSMUST00000180212 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm24169-201ENSMUST00000180244 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm23689-201ENSMUST00000180354 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm27359-201ENSMUST00000184153 110 ntBASIC11.08□□□□□ -0.64
Hist1h1aP43275 Gm27785-201ENSMUST00000184268 110 ntBASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms